Path 05 · 3 Lessons · 1 Module

Capstones

Capstone projects integrate skills acquired throughout the curriculum into complete computational pipelines. Each project requires processing real-world data, handling ambiguous or malformed inputs, executing analytical workflows, and generating formatted clinical or analytical reports.

Start PathEnter

By the End

Engineer complete computational biology pipelines from raw input files to structured analytical reports
Design robust validation routines that correctly handle malformed records and biological edge cases
Synthesize parsing, numerical computation, and reporting into maintainable Python scripts

Progress

0/3

Clinical Variant Analytical ReportStructured pipeline output format

records=10  malformed=4  filtered=1  kept=6
chr1:3    GCA  G     TP53    120  0.5100  deletion
chr1:25   G    GAAA  BRCA1    88  0.4900  insertion
summary: 6 variants in 3 genes, mean depth 81.8

Capstone Projects

Comprehensive applied projects requiring end-to-end implementation, robust edge-case handling, and rigorous pipeline validation.

3 lessons · 3 graded

Capstone - Clinical Variant Report5Advanced Capstone - Expression Atlas5Advanced Capstone - Sequence Toolkit5Advanced